diff --git a/.gitignore b/.gitignore
index bfeb25d..79cc25f 100644
--- a/.gitignore
+++ b/.gitignore
@@ -22,6 +22,4 @@ makefile~
 *~
 
 build/
-src/core/kernels/stencil_assembly.cuh
-src/core/kernels/stencil_process.cuh
 tests/
diff --git a/acc/.gitignore b/acc/.gitignore
deleted file mode 100644
index bc4b7d8..0000000
--- a/acc/.gitignore
+++ /dev/null
@@ -1,5 +0,0 @@
-build
-testbin
-
-# Except this file
-!.gitignore
diff --git a/acc/mhd_solver/.gitignore b/acc/mhd_solver/.gitignore
deleted file mode 100644
index bc4b7d8..0000000
--- a/acc/mhd_solver/.gitignore
+++ /dev/null
@@ -1,5 +0,0 @@
-build
-testbin
-
-# Except this file
-!.gitignore
diff --git a/acc/pc_mhd_solver/.gitignore b/acc/pc_mhd_solver/.gitignore
deleted file mode 100644
index bc4b7d8..0000000
--- a/acc/pc_mhd_solver/.gitignore
+++ /dev/null
@@ -1,5 +0,0 @@
-build
-testbin
-
-# Except this file
-!.gitignore
diff --git a/include/.gitignore b/include/.gitignore
deleted file mode 100644
index fa70d48..0000000
--- a/include/.gitignore
+++ /dev/null
@@ -1,2 +0,0 @@
-# Ignore the DSL headers
-stencil_defines.h
diff --git a/src/core/kernels/.gitignore b/src/core/kernels/.gitignore
deleted file mode 100644
index c5914af..0000000
--- a/src/core/kernels/.gitignore
+++ /dev/null
@@ -1,2 +0,0 @@
-# Ignore the generated headers
-stencil_process.cuh stencil_assembly.cuh