Removed duplicate genbenchmarkscripts
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@@ -1,8 +0,0 @@
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add_executable(genbenchmarkscripts main.c)
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add_custom_command(
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TARGET genbenchmarkscripts POST_BUILD
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COMMAND genbenchmarkscripts
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WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
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COMMENT "Generating benchmark scripts"
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)
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@@ -1,120 +0,0 @@
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#include <assert.h>
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#include <math.h>
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#include <stdio.h>
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#include <stdlib.h>
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#include <string.h>
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int
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main(void)
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{
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const int max_nprocs = 64;
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for (int nprocs = 1; nprocs <= max_nprocs; nprocs *= 2) {
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char filename[4096];
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sprintf(filename, "benchmark_%d.sh", nprocs);
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FILE* fp = fopen(filename, "w");
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assert(fp);
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// Boilerplate
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fprintf(fp, "#!/bin/bash\n");
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fprintf(fp, "#BATCH --job-name=astaroth\n"); // OK
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fprintf(fp, "#SBATCH --account=project_2000403\n"); // OK
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fprintf(fp, "#SBATCH --time=04:00:00\n"); // OK
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fprintf(fp, "#SBATCH --mem=0\n"); // OK
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fprintf(fp, "#SBATCH --partition=gpu\n"); // OK
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fprintf(fp, "#SBATCH --exclusive\n"); // OK
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fprintf(fp, "#SBATCH --cpus-per-task=10\n"); // OK
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fprintf(fp, "#SBATCH --output=benchmark-%d-%%j.out\n", nprocs);
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// HACK: exclude misconfigured nodes on Puhti
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fprintf(fp, "#SBATCH -x "
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"r04g[05-06],r02g02,r14g04,r04g07,r16g07,r18g[02-03],r15g08,r17g06,r13g04\n");
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// fprintf(fp, "#SBATCH --cpus-per-task=10\n");
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// nprocs, nodes, gpus
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const int max_gpus_per_node = 4;
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const int gpus_per_node = nprocs < max_gpus_per_node ? nprocs : max_gpus_per_node;
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const int nodes = (int)ceil((double)nprocs / max_gpus_per_node);
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fprintf(fp, "#SBATCH --gres=gpu:v100:%d\n", gpus_per_node); // OK
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fprintf(fp, "#SBATCH -n %d\n", nprocs); // OK
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fprintf(fp, "#SBATCH -N %d\n", nodes); // OK
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// fprintf(fp, "#SBATCH --exclusive\n");
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// if (nprocs >= 4)
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// fprintf(fp, "#SBATCH --ntasks-per-socket=2\n");
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// Modules
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// OpenMPI
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fprintf(fp, "module load gcc/8.3.0 cuda/10.1.168 cmake openmpi/4.0.3-cuda nccl\n");
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// fprintf(fp, "export UCX_TLS=rc,sm,cuda_copy,gdr_copy,cuda_ipc\n"); //
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// https://www.open-mpi.org/fa fprintf(fp, "export PSM2_CUDA=1\nexport PSM2_GPUDIRECT=1\n");
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// if (nprocs >= 32)
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// fprintf(fp, "export UCX_TLS=ud_x,cuda_copy,gdr_copy,cuda_ipc\n"); //
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// https://www.open-mpi.org/fa
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// HPCX
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// fprintf(fp, "module load gcc/8.3.0 cuda/10.1.168 cmake hpcx-mpi/2.5.0-cuda nccl\n");
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// fprintf(fp, "export UCX_MEMTYPE_CACHE=n\n"); // Workaround for bug in hpcx-mpi/2.5.0
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// Profile and run
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// fprintf(fp, "mkdir -p profile_%d\n", nprocs);
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/*
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const int nx = 256; // max size 2048;
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const int ny = nx;
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const int nz = nx;
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fprintf(fp,
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//"srun nvprof --annotate-mpi openmpi -o profile_%d/%%p.nvprof ./benchmark %d %d "
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//"%d\n",
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"srun ./benchmark %d %d %d\n", nx, ny, nz);
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*/
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// fprintf(fp, "srun ./benchmark %d %d %d\n", nx, ny, nz);
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const char* files[] = {
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"benchmark_decomp_1D", "benchmark_decomp_2D", "benchmark_decomp_3D",
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"benchmark_decomp_1D_comm", "benchmark_decomp_2D_comm", "benchmark_decomp_3D_comm",
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"benchmark_meshsize_256", "benchmark_meshsize_512", "benchmark_meshsize_1024",
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"benchmark_meshsize_2048", "benchmark_stencilord_2", "benchmark_stencilord_4",
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"benchmark_stencilord_6", "benchmark_stencilord_8", "benchmark_timings_control",
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"benchmark_timings_comp", "benchmark_timings_comm", "benchmark_timings_default",
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"benchmark_timings_corners", "benchmark_weak_128", "benchmark_weak_256",
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"benchmark_weak_512",
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};
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for (size_t i = 0; i < sizeof(files) / sizeof(files[0]); ++i) {
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int nn = 256;
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if (strcmp(files[i], "benchmark_meshsize_512") == 0)
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nn = 512;
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else if (strcmp(files[i], "benchmark_meshsize_1024") == 0)
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nn = 1024;
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else if (strcmp(files[i], "benchmark_meshsize_2048") == 0)
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nn = 2048;
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else if (strcmp(files[i], "benchmark_weak_128") == 0)
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nn = 128;
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else if (strcmp(files[i], "benchmark_weak_512") == 0)
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nn = 512;
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// W/ Fredriks tunings
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// (may cause Assertion `status == UCS_OK' failed errors)
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// fprintf(fp,
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// "$(cd %s && UCX_RNDV_THRESH=16384 UCX_RNDV_SCHEME=get_zcopy "
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// "UCX_MAX_RNDV_RAILS=1 srun ./benchmark %d %d %d && cd ..)\n",
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// files[i], nn, nn, nn);
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if (nodes >= 2) {
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fprintf(fp,
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"$(cd %s && UCX_RNDV_THRESH=16384 UCX_RNDV_SCHEME=get_zcopy "
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"UCX_MAX_RNDV_RAILS=1 srun --kill-on-bad-exit=0 ./benchmark %d %d %d && rm "
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"-f core.* && cd ..)\n",
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files[i], nn, nn, nn);
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}
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else {
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fprintf(fp,
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"$(cd %s && srun --kill-on-bad-exit=0 ./benchmark %d %d %d && rm -f core.* "
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"&& cd ..)\n",
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files[i], nn, nn, nn);
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}
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}
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fclose(fp);
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}
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return EXIT_SUCCESS;
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}
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