band matrix

This commit is contained in:
Carl William Pearson
2021-05-19 17:00:52 -06:00
parent ecd4f6c1a8
commit aae7176823

48
main.cu
View File

@@ -442,9 +442,9 @@ CsrMat<Where::host> random_matrix(const int64_t m, const int64_t n, const int64_
CooMat coo(m,n);
while(coo.nnz() < nnz) {
int toPush = nnz - coo.nnz();
int64_t toPush = nnz - coo.nnz();
std::cerr << "adding " << toPush << " non-zeros\n";
for (int _ = 0; _ < toPush; ++_) {
for (int64_t _ = 0; _ < toPush; ++_) {
int r = rand() % m;
int c = rand() % n;
float e = 1.0;
@@ -460,6 +460,38 @@ CsrMat<Where::host> random_matrix(const int64_t m, const int64_t n, const int64_
return csr;
};
// nxn diagonal matrix with bandwidth b
CsrMat<Where::host> random_band_matrix(const int64_t n, const int64_t bw, const int64_t nnz) {
CooMat coo(n,n);
while(coo.nnz() < nnz) {
int64_t toPush = nnz - coo.nnz();
std::cerr << "adding " << toPush << " non-zeros\n";
for (int64_t _ = 0; _ < toPush; ++_) {
int r = rand() % n; // random row
// column in the band
int lb = r - bw;
int ub = r + bw + 1;
int64_t c = rand() % (ub - lb) + lb;
if (c < 0 || c > n) {
continue; // don't over-weight first or last column
}
float e = 1.0;
coo.push_back(r, c, e);
}
std::cerr << "removing duplicate non-zeros\n";
coo.remove_duplicates();
}
coo.sort();
std::cerr << "coo: " << coo.num_rows() << "x" << coo.num_cols() << "\n";
CsrMat<Where::host> csr(coo);
std::cerr << "csr: " << csr.num_rows() << "x" << csr.num_cols() << " w/ " << csr.nnz() << "\n";
return csr;
};
std::vector<float> random_vector(const int64_t n) {
return std::vector<float>(n, 1.0);
}
@@ -682,13 +714,18 @@ int main (int argc, char **argv) {
MPI_Comm_size(MPI_COMM_WORLD, &size);
std::cerr << "get a gpu...\n";
CUDA_RUNTIME(cudaSetDevice(rank));
CUDA_RUNTIME(cudaSetDevice(rank % 4));
CUDA_RUNTIME(cudaFree(0));
std::cerr << "barrier...\n";
MPI_Barrier(MPI_COMM_WORLD);
// int64_t m = 150000;
// int64_t n = 150000;
// int64_t nnz = 11000000;
// or
int64_t m = 150000;
int64_t n = 150000;
int64_t n = m;
int64_t bw = m/size; // ~50% local vs remote non-zeros for most ranks
int64_t nnz = 11000000;
CsrMat<Where::host> lA; // "local A"
@@ -696,7 +733,8 @@ int main (int argc, char **argv) {
// generate and distribute A
if (0 == rank) {
std::cerr << "generate matrix\n";
lA = random_matrix(m, n, nnz);
// lA = random_matrix(m, n, nnz);
lA = random_band_matrix(m, bw, nnz);
std::cerr << "partition matrix\n";
std::vector<CsrMat<Where::host>> As = part_by_rows(lA, size);
for (size_t dst = 1; dst < size; ++dst) {